Squashed 'third_party/allwpilib/' changes from f1a82828fe..ce550705d7

ce550705d7 [ntcore] Fix client "received unknown id -1" (#6186)
3989617bde [ntcore] NetworkTable::GetStruct: Add I template param (#6183)
f1836e1321 [fieldImages] Fix 2024 field json (#6179)
d05f179a9a [build] Fix running apriltagsvision Java example (#6173)
b1b03bed85 [wpilib] Update MotorControllerGroup deprecation message (#6171)
fa63fbf446 LICENSE.md: Bump year to 2024 (#6169)
4809f3d0fc [apriltag] Add 2024 AprilTag locations (#6168)
dd90965362 [wpiutil] Fix RawFrame.setInfo() NPE (#6167)
8659372d08 [fieldImages] Add 2024 field image (#6166)
a2e4d0b15d [docs] Fix docs for SysID routine (#6164)
0a46a3a618 [wpilib] Make ADXL345 default I2C address public (#6163)
7c26bc70ab [sysid] Load DataLog files directly for analysis (#6103)
f94e3d81b9 [docs] Fix SysId routine JavaDoc warnings (#6159)
6bed82a18e [wpilibc] Clean up C++ SysId routine (#6160)
4595f84719 [wpilib] Report LiveWindow-enabled-in-test (#6158)
707cb06105 [wpilib] Add SysIdRoutine logging utility and command factory (#6033)
3e40b9e5da [wpilib] Correct SmartDashboard usage reporting (#6157)
106518c3f8 [docs] Fix wpilibj JavaDoc warnings (#6154)
19cb2a8eb4 [wpilibj] Make class variables private to match C++ (#6153)
13f4460e00 [docs] Add missing docs to enum fields (NFC) (#6150)
4210f5635d [docs] Fix warnings about undocumented default constructors (#6151)
0f060afb55 [ntcore] Disable WebSocket fragmentation (#6149)
f29a7d2e50 [docs] Add missing JavaDocs (#6146)
6e58db398d [commands] Make Java fields private (#6148)
4ac0720385 [build] Clean up CMake files (#6141)
44db3e0ac0 [sysid] Make constexpr variables outside class scope inline (#6145)
73c7d87db7 [glass] NTStringChooser: Properly set retained (#6144)
25636b712f [build] Remove unnecessary native dependencies in wpilibjExamples (#6143)
01fb98baaa [docs] Add Missing JNI docs from C++ (NFC) (#6139)
5c424248c4 [wpilibj] Remove unused AnalogTriggerException (#6142)
c486972c55 [wpimath] Make ExponentialProfile.State mutable (#6138)
783acb9b72 [wpilibj] Store long preferences as integers (#6136)
99ab836894 [wpiutil] Add missing JavaDocs (NFC) (#6132)
ad0859a8c9 [docs] Add missing JavaDocs (#6125)
5579219716 [docs] Exclude quickbuf files and proto/struct packages from doclint (#6128)
98f06911c7 [sysid] Use eigenvector component instead of eigenvalue for fit quality check (#6131)
e1d49b975c [wpimath] Add LinearFilter reset() overload to initialize input and output buffers (#6133)
8a0bf2b7a4 [hal] Add CANAPITypes to java (#6121)
91d8837c11 [wpilib] Make protected fields in accelerometers/gyros private (#6134)
e7c9f27683 [wpilib] Add functional interface equivalents to MotorController (#6053)
8aca706217 [glass] Add type information to SmartDashboard menu (#6117)
7d3e4ddba9 [docs] Add warning about using user button to docs (NFC) (#6129)
ec3cb3dcba [build] Disable clang-tidy warning about test case names (#6127)
495585b25d [examples] Update april tag family to 36h11 (#6126)
f9aabc5ab2 [wpilib] Throw early when EventLoop is modified while running (#6115)
c16946c0ec [hal] Add CANJNI docs (NFC) (#6120)
b7f4eb2811 [doc] Update maven artifacts for units and apriltags (NFC) (#6123)
f419a62b38 [doc] Update maintainers.md (NFC) (#6124)
938bf45fd9 [wpiutil] Remove type param from ProtobufSerializable and StructSerializable (#6122)
c34debe012 [docs] Link to external OpenCV docs (#6119)
07183765de [hal] Fix formatting of HAL_ENUM enums (NFC) (#6114)
af46034b7f [wpilib] Document only first party controllers are guaranteed to have correct mapping (#6112)
636ef58d94 [hal] Properly error check readCANStreamSession (#6108)
cc631d2a69 [build] Fix generated source set location in the HAL (#6113)
09f76b32c2 [wpimath] Compile with UTF-8 encoding (#6111)
47c5fd8620 [sysid] Check data quality before OLS (#6110)
24a76be694 [hal] Add method to detect if the CAN Stream has overflowed (#6105)
9333951736 [hal] Allocate CANStreamMessage in JNI if null (#6107)
6a2d3c30a6 [wpiutil] Struct: Add info template parameter pack (#6086)
e07de37e64 [commands] Mark ParallelDeadlineGroup.setDeadline() final (#6102)
141241d2d6 [wpilib] Fix usage reporting for static classes (#6090)
f2c2bab7dc [sysid] Fix adjusted R² calculation (#6101)
5659038443 [wpiutil,cscore,apriltag] Fix RawFrame (#6098)
8aeee03626 [commands] Improve error message when composing commands twice in same composition (#6091)
55508706ff [wpiutil,cscore] Move VideoMode.PixelFormat to wpiutil (#6097)
ab78b930e9 [wpilib] ADIS16470: Add access to all 3 axes (#6074)
795d4be9fd [wpilib] Fix precision issue in Color round-and-clamp (#6100)
7aa9ad44b8 [commands] Deprecate C++ TransferOwnership() (#6095)
92c81d0791 [ci] Update pregenerate workflow to actions/checkout@v4 (#6094)
1ce617be07 [ci] Update artifact actions to v4 (#6092)
2441b57156 [wpilib] Add PWMSparkFlex MotorController (#6089)
21d1972d7a [wpiutil] DataLog: Ensure file is written on shutdown (#6087)
c29e8c66cf [wpiutil] DataLog: Fix UB in AppendImpl (#6088)
ab309e34ef [glass] Fix order of loading window settings (#6056)
22a322c9f3 [wpimath] Report error on negative PID gains (#6055)
1dba26c937 [wpilib] Add method to get breaker fault at a specific channel in PowerDistribution[Sticky]Faults (#5521)
ef1cb3f41e [commands] Fix compose-while-scheduled issue and test all compositions (#5581)
aeb1a4aa33 [wpiutil] Add serializable marker interfaces (#6060)
c1178d5add [wpilib] Add StadiaController and command wrapper (#6083)
4e4a468d4d [wpimath] Make feedforward classes throw exceptions for negative Kv or Ka (#6084)
d1793f077d [build] cmake: Add NO_WERROR option to disable -Werror (#6071)
43fb6e9f87 [glass] Add Profiled PID controller support & IZone Support (#5959)
bcef6c5398 [apriltag] Fix Java generation functions (#6063)
4059e0cd9f [hal,wpilib] Add function to control "Radio" LED (#6073)
0b2cfb3abc [dlt] Change datalogtool default folder to logs folder (#6079)
df5e439b0c [wpilib] PS4Controller: enable usage reporting (#6081)
0ff7478968 [cscore] Fix RawFrame class not being loaded in JNI (#6077)
6f23d32fe1 [wpilib] AddressableLED: Update warning about single driver (NFC) (#6069)
35a1c52788 [build] Upgrade quickbuf to 1.3.3 (#6072)
e4e2bafdb1 [sysid] Document timestamp units (#6065)
3d201c71f7 [ntcore] Fix overlapping subscriber handling (#6067)
f02984159f [glass] Check for null entries when updating struct/proto (#6059)
a004c9e05f [commands] SubsystemBase: allow setting name in constructor (#6052)
0b4c6a1546 [wpimath] Add more docs to SimulatedAnnealing (NFC) (#6054)
ab15dae887 [wpilib] ArcadeDrive: Fix max output handling (#6051)
9599c1f56f [hal] Add usage reporting ids from 2024v2 image (#6041)
f87c64af8a [wpimath] MecanumDriveWheelSpeeds: Fix desaturate() (#6040)
8798700cec [wpilibcExamples] Add inline specifier to constexpr constants (#6049)
85c9ae6eff [wpilib] Fix PS5 Controller mappings (#6050)
7c8b7a97ad [wpiutil] Zero out roborio system timestamp (#6042)
d9b504bc84 [wpilib] DataLogManager: Change sim location to logs subdir (#6039)
906b810136 [build] cmake: Fix ntcore generated header install (#6038)
56e5b404d1 Update to final 2024 V2 image (#6034)
8723ee5c39 [ntcore] Add cached topic property (#5494)
192a28af47 Fix JDK 21 warnings (#6028)
d40bdd70ba [build] Upgrade to spotbugs Gradle plugin 6.0.2 (#6027)
7bfadf32e5 [wpilibj] Joystick: make remainder of get axis methods final (#6024)
a770110438 [commands] CommandCompositionError: Include stacktrace of original composition (#5984)
54a55b8b53 [wpiutil,hal] Update image; init Rio Now() HMB with a FPGA session (#6016)
7d4e515a6b [wpimath] Simplify calculation of C for DARE precondition (#6022)
5200316c14 [ntcore] Update transmit period on topic add/remove (#6021)
ddf79a25d4 [wpiunits] Overload Measure.per(Time) to return Measure<Velocity> (#6018)
a71adef316 [wpiutil] Clean up circular_buffer iterator syntax (#6020)
39a0bf4b98 [examples] Call resetOdometry() when controller command is executed (#5905)
f5fc101fda [build] cmake: Export jars and clean up jar installs (#6014)
38bf024c96 [build] Update to Gradle 8.5 (#6007)
9d11544c18 [wpimath] Rotate traveling salesman solution so input and solution have same initial pose (#6015)
28deba20f5 [wpimath] Commit generated quickbuf Java files (#5994)
c2971c0bb3 [build] cmake: Export apriltag and wpimath (#6012)
41cfc961e4 gitattributes: Add linguist-generated locations (#6004)
14c3ade155 [wpimath] Struct cleanup (#6011)
90757b9e90 [wpilib] Make Color::HexString() constexpr (#5985)
2676b77873 Fix compilation issues that occur when building with bazel (#6008)
d32c10487c [examples] Update C++ examples to use CommandPtr (#5988)
9bc5fcf886 [build] cmake: Default WITH_JAVA_SOURCE to WITH_JAVA (#6005)
d431abba3b [upstream_utils] Fix GCEM namespace usage and add hypot(x, y, z) (#6002)
2bb1409b82 Clean up Java style (#5990)
66172ab288 Remove submodule (#6003)
e8f8c0ceb0 [upstream_utils] Update to latest Eigen HEAD (#5996)
890992a849 [hal] Commit generated usage reporting files (#5993)
a583ca01e1 [wpiutil] Change Struct to allow non-constexpr implementation (#5992)
ca272de400 [build] Fix Gradle compile_commands.json and clang-tidy warnings (#5977)
76ae090570 [wpiutil] type_traits: Add is_constexpr() (#5997)
5172ab8fd0 [commands] C++ CommandPtr: Prevent null initialization (#5991)
96914143ba [build] Bump native-utils to fix compile_commands.json (#5989)
464e6121ef [ci] Report failed status to Azure on failed tests (#2654)
5dad46cd45 [wpimath] Commit generated files (#5986)
54ab65a63a [ntcore] Commit generated files (#5962)
7ed900ae3a [wpilib] Add hex string constructor to Color and Color8Bit (#5063)
74b85b76a9 [wpimath] Make gcem call std functions if not constant-evaluated (#5983)
30816111db [wpimath] Fix TimeInterpolatableBuffer crash (#5972)
5cc923de33 [wpilib] DataLogManager: Use logs subdirectory on USB drives (#5975)
1144115da0 [commands] Add GetName to Subsystem, use in Scheduler tracer epochs (#5836)
ac7d726ac3 [wpimath] Add simulated annealing (#5961)
e09be72ee0 [wpimath] Remove unused SimpleMatrixUtils class (#5979)
0f9ebe92d9 [wpimath] Add generic circular buffer class to Java (#5969)
9fa28eb07a [ci] Bump actions/checkout to v4 (#5736)
ca684ac207 [hal] Add capability to read power distribution data as a stream (#4983)
51eecef2bd [wpimath] Optimize 2nd derivative of quintic splines (#3292)
4fcf0b25a1 [build] Apply a formatter for CMake files (#5973)
9b8011aa67 [build] Pin wpiformat version (#5982)
e00a0e84c1 [build] cmake: fix protobuf dependency finding for certain distributions (#5981)
23dd591394 [upstream_utils] Remove libuv patch that adjusts whitespace (#5976)
b0719942f0 [wpiutil] Timestamp: Report errors on Rio HMB init failure (#5974)
7bc89c4322 [wpilib] Update getAlliance() docs (NFC) (#5971)
841ea682d1 [upstream_utils] Upgrade to LLVM 17.0.5 (#5970)
a74db52dae [cameraserver] Add getVideo() pixelFormat overload (#5966)
a7eb422662 [build] Update native utils for new compile commands files (#5968)
544b231d4d [sysid] Add missing cassert include (#5967)
31cd015970 [wpimath] Add SysId doc links to LinearSystemId in C++ (NFC) (#5960)
9280054eab Revert "[build] Export wpimath protobuf symbols (#5952)"
2aba97c610 Export pb files from wpimath
c80b2d2017 [build] Export wpimath protobuf symbols (#5952)
3c0652c18a [cscore] Replace CS_PixelFormat with WPI_PixelFormat (#5954)
95716eb0cb [wpiunits] Documentation improvements (#5932)
423fd75fa8 [wpilib] Default LiveWindowEnabledInTest to false (#5950)
dfdea9c992 [wpimath] Make KalmanFilter variant for asymmetric updates (#5951)
ca81ced409 [wpiutil] Move RawFrame to wpiutil; add generation of RawFrame for AprilTags (#5923)
437cc91af5 [cscore] CvSink: Allow specifying output PixelFormat (#5943)
25b7dca46b [build] Remove CMake flat install option (#5944)
bb05e20247 [wpimath] Add protobuf/struct for trivial types (#5935)
35744a036e [wpimath] Move struct/proto classes to separate files (#5918)
80d7ad58ea [build] Declare platform launcher dependency explicitly (#5909)
f8d983b154 [ntcore] Protobuf/Struct: Use atomic_bool instead of atomic_flag (#5946)
4a44210ee3 [ntcore] NetworkTableInstance: Suppress unused lambda capture warning (#5947)
bdc8620d55 [upstream_utils] Fix fmt compilation errors on Windows (#5948)
0ca1e9b5f9 [wpimath] Add basic wpiunits support (#5821)
cc30824409 [ntcore] Increase client meta-topic decoding limit (#5934)
b1fad062f7 [wpilib] Use RKDP in DifferentialDrivetrainSim (#5931)
ead9ae5a69 [build] Add generateProto dependency to test and dev (#5933)
cfbff32185 [wpiutil] timestamp: Fix startup race on Rio (#5930)
7d90d0bcc3 [wpimath] Clean up StateSpaceUtil (#5891)
7755e45aac [build] Add generated protobuf headers to C++ test include path (#5926)
3985c031da [ntcore] ProtobufSubscriber: Fix typos (#5928)
7a87fe4b60 [ntcore] ProtobufSubscriber: Make mutex and msg mutable (#5927)
09f3ed6a5f [commands] Add static Trigger factories for robot mode changes (#5902)
79dd795bc0 [wpimath] Clean up VecBuilder and MatBuilder (#5906)
e117274a67 [wpilib] Change default Rio log dir from /home/lvuser to /home/lvuser/logs (#5899)
a8b80ca256 [upstream_utils] Update to libuv 1.47.0 (#5889)
b3a9c3e96b [build] Bump macOS deployment target to 12 (#5890)
0f8129677b [build] Distribute wpimath protobuf headers (#5925)
d105f9e3e9 [wpiutil] ProtobufBuffer: Fix buffer reallocation (#5924)
c5f2f6a0fb [fieldImages] Fix typo in field images artifact name (#5922)
c1a57e422a [commands] Clean up make_vector.h (#5917)
78ebc6e9ec [wpimath] change G to gearing in LinearSystemId factories (#5834)
9ada181866 [hal] DriverStation.h: Add stddef.h include (#5897)
95fa5ec72f [wpilibc,ntcoreffi] DataLogManager: join on Stop() call (#5910)
b6f2d3cc14 [build] Remove usage of Version.parse (#5911)
cc2cbeb04c [examples] Replace gyro rotation with poseEstimator rotation (#5900)
fa6b171e1c [wpiutil] Suppress protobuf warning false positives on GCC 13 (#5907)
d504639bbe [apriltag] Improve AprilTag docs (#5895)
3a1194be40 Replace static_cast<void>() with [[maybe_unused]] attribute (#5892)
70392cbbcb [build] cmake: Add protobuf dependency to wpiutil-config (#5886)
17c1bd5a83 [ntcore] Use json_fwd (#5881)
e69a9efeba [wpilibcExamples] Match array parameter bounds (#5880)
14dcd0d26f Use char instead of uint8_t for json::parse (#5877)
ec1d261984 [hal] Fix garbage data for match info before DS connection (#5879)
63dbf5c614 [wpiutil] MemoryBuffer: Fix normal read and file type check (#5875)
b2e7be9250 [ntcore] Only datalog meta-topics if specifically requested (#5873)
201a42a3cd [wpimath] Reorder TrapezoidProfile.calculate() arguments (#5874)
04a781b4d7 [apriltag] Add GetTags to C++ version of AprilTagFieldLayout (#5872)
87a8a1ced4 [docs] Exclude eigen and protobuf from doxygen (#5871)

git-subtree-dir: third_party/allwpilib
git-subtree-split: ce550705d7cdab117c0153a202973fc026a81274
Signed-off-by: Maxwell Henderson <mxwhenderson@gmail.com>
Change-Id: Ic8645d0551d62b411b0a816c493f0f33291896a1
diff --git a/.github/workflows/cmake.yml b/.github/workflows/cmake.yml
index 963dc75..a101b4a 100644
--- a/.github/workflows/cmake.yml
+++ b/.github/workflows/cmake.yml
@@ -32,7 +32,7 @@
 
       - name: Install QuickBuffers (Linux)
         if: runner.os == 'Linux'
-        run: wget https://github.com/HebiRobotics/QuickBuffers/releases/download/1.3.2/protoc-gen-quickbuf_1.3.2_amd64.deb && sudo apt install ./protoc-gen-quickbuf_1.3.2_amd64.deb
+        run: wget https://github.com/HebiRobotics/QuickBuffers/releases/download/1.3.3/protoc-gen-quickbuf_1.3.3_amd64.deb && sudo apt install ./protoc-gen-quickbuf_1.3.3_amd64.deb
 
       - name: Install opencv (macOS)
         run: brew install opencv protobuf@3 ninja
@@ -50,7 +50,7 @@
       - name: Install jinja
         run: python -m pip install jinja2
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - name: configure
         run: cmake -S . -B build -G "Ninja" -DCMAKE_C_COMPILER_LAUNCHER=sccache -DCMAKE_CXX_COMPILER_LAUNCHER=sccache ${{ matrix.flags }}
@@ -82,7 +82,7 @@
       - name: Install jinja
         run: python -m pip install jinja2
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - name: Run vcpkg
         uses: lukka/run-vcpkg@v11.1
diff --git a/.github/workflows/comment-command.yml b/.github/workflows/comment-command.yml
index 77ebae9..7dd0ad6 100644
--- a/.github/workflows/comment-command.yml
+++ b/.github/workflows/comment-command.yml
@@ -19,12 +19,12 @@
               comment_id: context.payload.comment.id,
               content: "rocket",
             });
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
+          fetch-depth: 0
           token: ${{ secrets.COMMENT_COMMAND_PAT_TOKEN }}
       - name: Fetch all history and metadata
         run: |
-          git fetch --prune --unshallow
           git checkout -b pr
           git branch -f main origin/main
       - name: Checkout PR
diff --git a/.github/workflows/documentation.yml b/.github/workflows/documentation.yml
index 83d74da..b618ff8 100644
--- a/.github/workflows/documentation.yml
+++ b/.github/workflows/documentation.yml
@@ -16,7 +16,7 @@
     if: github.repository_owner == 'wpilibsuite' && (github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/tags/v'))
     concurrency: ci-docs-publish
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
           persist-credentials: false
diff --git a/.github/workflows/fix_compile_commands.py b/.github/workflows/fix_compile_commands.py
new file mode 100755
index 0000000..8a52830
--- /dev/null
+++ b/.github/workflows/fix_compile_commands.py
@@ -0,0 +1,42 @@
+#!/usr/bin/env python3
+
+import argparse
+import json
+
+
+def main():
+    parser = argparse.ArgumentParser(
+        description="Fix compile_commands.json generated by Gradle"
+    )
+    parser.add_argument("filename", help="compile_commands.json location")
+    cmd_args = parser.parse_args()
+
+    # Read JSON
+    with open(cmd_args.filename) as f:
+        data = json.load(f)
+
+    for obj in data:
+        out_args = []
+
+        # Filter out -isystem flags that cause false positives
+        iter_args = iter(obj["arguments"])
+        for arg in iter_args:
+            if arg == "-isystem":
+                next_arg = next(iter_args)
+
+                # /usr/lib/gcc/x86_64-pc-linux-gnu/13.2.1/include/xmmintrin.h:54:1:
+                # error: conflicting types for '_mm_prefetch' [clang-diagnostic-error]
+                if not next_arg.startswith("/usr/lib/gcc/"):
+                    out_args += ["-isystem", next_arg]
+            else:
+                out_args.append(arg)
+
+        obj["arguments"] = out_args
+
+    # Write JSON
+    with open(cmd_args.filename, "w") as f:
+        json.dump(data, f, indent=2)
+
+
+if __name__ == "__main__":
+    main()
diff --git a/.github/workflows/gradle-wrapper-validation.yml b/.github/workflows/gradle-wrapper-validation.yml
index d678bc4..9c7b7a2 100644
--- a/.github/workflows/gradle-wrapper-validation.yml
+++ b/.github/workflows/gradle-wrapper-validation.yml
@@ -10,5 +10,5 @@
     name: "Validation"
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - uses: gradle/wrapper-validation-action@v1
diff --git a/.github/workflows/gradle.yml b/.github/workflows/gradle.yml
index 3af54fb..7ed26ed 100644
--- a/.github/workflows/gradle.yml
+++ b/.github/workflows/gradle.yml
@@ -37,7 +37,7 @@
           large-packages: false
           docker-images: false
           swap-storage: false
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
       - name: Set release environment variable
@@ -54,14 +54,14 @@
           ARTIFACTORY_PUBLISH_PASSWORD: ${{ secrets.ARTIFACTORY_PASSWORD }}
       - name: Check free disk space
         run: df .
-      - uses: actions/upload-artifact@v3
+      - uses: actions/upload-artifact@v4
         with:
           name: ${{ matrix.artifact-name }}
           path: build/allOutputs
 
   build-host:
     env:
-      MACOSX_DEPLOYMENT_TARGET: 11
+      MACOSX_DEPLOYMENT_TARGET: 12
     strategy:
       fail-fast: false
       matrix:
@@ -109,7 +109,7 @@
     name: "Build - ${{ matrix.artifact-name }}"
     runs-on: ${{ matrix.os }}
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
       - uses: actions/setup-java@v3
@@ -159,7 +159,7 @@
       - name: Check disk free space (Windows)
         run: wmic logicaldisk get caption, freespace
         if: matrix.os == 'windows-2022'
-      - uses: actions/upload-artifact@v3
+      - uses: actions/upload-artifact@v4
         with:
           name: ${{ matrix.artifact-name }}
           path: ${{ matrix.build-dir }}/${{ matrix.outputs }}
@@ -168,7 +168,7 @@
     name: "Build - Documentation"
     runs-on: ubuntu-22.04
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
       - uses: actions/setup-java@v3
@@ -183,7 +183,7 @@
         env:
           ARTIFACTORY_PUBLISH_USERNAME: ${{ secrets.ARTIFACTORY_USERNAME }}
           ARTIFACTORY_PUBLISH_PASSWORD: ${{ secrets.ARTIFACTORY_PASSWORD }}
-      - uses: actions/upload-artifact@v3
+      - uses: actions/upload-artifact@v4
         with:
           name: Documentation
           path: docs/build/outputs
@@ -206,13 +206,13 @@
           large-packages: false
           docker-images: false
           swap-storage: false
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         if: |
           github.repository_owner == 'wpilibsuite' &&
           (github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/tags/v'))
         with:
           repository: wpilibsuite/build-tools
-      - uses: actions/download-artifact@v3
+      - uses: actions/download-artifact@v4
         if: |
           github.repository_owner == 'wpilibsuite' &&
           (github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/tags/v'))
@@ -255,7 +255,7 @@
           RUN_AZURE_ARTIFACTORY_RELEASE: "TRUE"
           ARTIFACTORY_PUBLISH_USERNAME: ${{ secrets.ARTIFACTORY_USERNAME }}
           ARTIFACTORY_PUBLISH_PASSWORD: ${{ secrets.ARTIFACTORY_PASSWORD }}
-      - uses: actions/upload-artifact@v3
+      - uses: actions/upload-artifact@v4
         if: |
           github.repository_owner == 'wpilibsuite' &&
           (github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/tags/v'))
diff --git a/.github/workflows/lint-format.yml b/.github/workflows/lint-format.yml
index fe20537..53de173 100644
--- a/.github/workflows/lint-format.yml
+++ b/.github/workflows/lint-format.yml
@@ -15,11 +15,11 @@
     name: "wpiformat"
     runs-on: ubuntu-22.04
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
       - name: Fetch all history and metadata
         run: |
-          git config --global --add safe.directory /__w/allwpilib/allwpilib
-          git fetch --prune --unshallow
           git checkout -b pr
           git branch -f main origin/main
       - name: Set up Python 3.8
@@ -27,7 +27,7 @@
         with:
           python-version: 3.8
       - name: Install wpiformat
-        run: pip3 install wpiformat
+        run: pip3 install wpiformat==2023.36
       - name: Run
         run: wpiformat
       - name: Check output
@@ -35,7 +35,7 @@
       - name: Generate diff
         run: git diff HEAD > wpiformat-fixes.patch
         if: ${{ failure() }}
-      - uses: actions/upload-artifact@v3
+      - uses: actions/upload-artifact@v4
         with:
           name: wpiformat fixes
           path: wpiformat-fixes.patch
@@ -53,11 +53,12 @@
     runs-on: ubuntu-22.04
     container: wpilib/roborio-cross-ubuntu:2023-22.04
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
       - name: Fetch all history and metadata
         run: |
           git config --global --add safe.directory /__w/allwpilib/allwpilib
-          git fetch --prune --unshallow
           git checkout -b pr
           git branch -f main origin/main
       - name: Set up Python 3.8
@@ -67,21 +68,27 @@
       - name: Install wpiformat
         run: pip3 install wpiformat
       - name: Create compile_commands.json
-        run: ./gradlew generateCompileCommands -Ptoolchain-optional-roboRio
+        run: |
+          ./gradlew generateCompileCommands -Ptoolchain-optional-roboRio
+          ./.github/workflows/fix_compile_commands.py build/TargetedCompileCommands/linuxx86-64release/compile_commands.json
+          ./.github/workflows/fix_compile_commands.py build/TargetedCompileCommands/linuxx86-64debug/compile_commands.json
       - name: List changed files
         run: wpiformat -list-changed-files
-      - name: Run clang-tidy
-        run: wpiformat -no-format -tidy-changed -compile-commands=build/compile_commands/linuxx86-64 -vv
+      - name: Run clang-tidy release
+        run: wpiformat -no-format -tidy-changed -compile-commands=build/TargetedCompileCommands/linuxx86-64release -vv
+      - name: Run clang-tidy debug
+        run: wpiformat -no-format -tidy-changed -compile-commands=build/TargetedCompileCommands/linuxx86-64debug -vv
   javaformat:
     name: "Java format"
     runs-on: ubuntu-22.04
     container: wpilib/ubuntu-base:22.04
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
       - name: Fetch all history and metadata
         run: |
           git config --global --add safe.directory /__w/allwpilib/allwpilib
-          git fetch --prune --unshallow
           git checkout -b pr
           git branch -f main origin/main
       - name: Run Java format
@@ -95,7 +102,7 @@
     name: "Documentation"
     runs-on: ubuntu-22.04
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
       - uses: actions/setup-java@v3
diff --git a/.github/workflows/pregenerate.yml b/.github/workflows/pregenerate.yml
new file mode 100644
index 0000000..fb85149
--- /dev/null
+++ b/.github/workflows/pregenerate.yml
@@ -0,0 +1,46 @@
+name: Check Pregenerated Files

+

+on:

+  pull_request:

+  push:

+    branches-ignore:

+      - main

+

+concurrency:

+  group: ${{ github.workflow }}-${{ github.head_ref || github.ref }}

+  cancel-in-progress: true

+

+jobs:

+  update:

+    name: "Update"

+    runs-on: ubuntu-22.04

+    steps:

+      - uses: actions/checkout@v4

+        with:

+          fetch-depth: 0

+      - name: Set up Python 3.9

+        uses: actions/setup-python@v4

+        with:

+          python-version: 3.9

+      - name: Install jinja

+        run: python -m pip install jinja2

+      - name: Install protobuf dependencies

+        run: sudo apt-get update && sudo apt-get install -y protobuf-compiler && wget https://github.com/HebiRobotics/QuickBuffers/releases/download/1.3.3/protoc-gen-quickbuf-1.3.3-linux-x86_64.exe && chmod +x protoc-gen-quickbuf-1.3.3-linux-x86_64.exe

+      - name: Run hal

+        run: ./hal/generate_usage_reporting.py

+      - name: Run ntcore

+        run: ./ntcore/generate_topics.py

+      - name: Run wpimath

+        run: ./wpimath/generate_numbers.py && ./wpimath/generate_quickbuf.py protoc protoc-gen-quickbuf-1.3.3-linux-x86_64.exe

+      - name: Add untracked files to index so they count as changes

+        run: git add -A

+      - name: Check output

+        run: git --no-pager diff --exit-code HEAD

+      - name: Generate diff

+        run: git diff HEAD > pregenerated-files-fixes.patch

+        if: ${{ failure() }}

+      - uses: actions/upload-artifact@v4

+        with:

+          name: pregenerated-files-fixes

+          path: pregenerated-files-fixes.patch

+        if: ${{ failure() }}

diff --git a/.github/workflows/sanitizers.yml b/.github/workflows/sanitizers.yml
index c0b6ac3..cf4d108 100644
--- a/.github/workflows/sanitizers.yml
+++ b/.github/workflows/sanitizers.yml
@@ -33,7 +33,7 @@
 
       - name: Install QuickBuffers
         if: runner.os == 'Linux'
-        run: wget https://github.com/HebiRobotics/QuickBuffers/releases/download/1.3.2/protoc-gen-quickbuf_1.3.2_amd64.deb && sudo apt install ./protoc-gen-quickbuf_1.3.2_amd64.deb
+        run: wget https://github.com/HebiRobotics/QuickBuffers/releases/download/1.3.3/protoc-gen-quickbuf_1.3.3_amd64.deb && sudo apt install ./protoc-gen-quickbuf_1.3.3_amd64.deb
 
       - name: Run sccache-cache
         uses: mozilla-actions/sccache-action@v0.0.3
@@ -41,7 +41,7 @@
       - name: Install jinja
         run: python -m pip install jinja2
 
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - name: configure
         run: mkdir build && cd build && cmake -G Ninja -DCMAKE_C_COMPILER_LAUNCHER=sccache -DCMAKE_CXX_COMPILER_LAUNCHER=sccache -DCMAKE_C_COMPILER:FILEPATH=/usr/bin/clang-14 -DCMAKE_CXX_COMPILER:FILEPATH=/usr/bin/clang++-14 -DWITH_JAVA=OFF ${{ matrix.cmake-flags }} ..
diff --git a/.github/workflows/upstream-utils.yml b/.github/workflows/upstream-utils.yml
index 0e4a46f..afaffd5 100644
--- a/.github/workflows/upstream-utils.yml
+++ b/.github/workflows/upstream-utils.yml
@@ -15,10 +15,11 @@
     name: "Update"
     runs-on: ubuntu-22.04
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
       - name: Fetch all history and metadata
         run: |
-          git fetch --prune --unshallow
           git checkout -b pr
           git branch -f main origin/main
       - name: Set up Python 3.9