Squashed 'third_party/eigen/' changes from 61d72f6..cf794d3


Change-Id: I9b814151b01f49af6337a8605d0c42a3a1ed4c72
git-subtree-dir: third_party/eigen
git-subtree-split: cf794d3b741a6278df169e58461f8529f43bce5d
diff --git a/cmake/FindHWLOC.cmake b/cmake/FindHWLOC.cmake
new file mode 100644
index 0000000..a831b5c
--- /dev/null
+++ b/cmake/FindHWLOC.cmake
@@ -0,0 +1,331 @@
+###
+#
+# @copyright (c) 2009-2014 The University of Tennessee and The University
+#                          of Tennessee Research Foundation.
+#                          All rights reserved.
+# @copyright (c) 2012-2014 Inria. All rights reserved.
+# @copyright (c) 2012-2014 Bordeaux INP, CNRS (LaBRI UMR 5800), Inria, Univ. Bordeaux. All rights reserved.
+#
+###
+#
+# - Find HWLOC include dirs and libraries
+# Use this module by invoking find_package with the form:
+#  find_package(HWLOC
+#               [REQUIRED]) # Fail with error if hwloc is not found
+#
+# This module finds headers and hwloc library.
+# Results are reported in variables:
+#  HWLOC_FOUND           - True if headers and requested libraries were found
+#  HWLOC_INCLUDE_DIRS    - hwloc include directories
+#  HWLOC_LIBRARY_DIRS    - Link directories for hwloc libraries
+#  HWLOC_LIBRARIES       - hwloc component libraries to be linked
+#
+# The user can give specific paths where to find the libraries adding cmake
+# options at configure (ex: cmake path/to/project -DHWLOC_DIR=path/to/hwloc):
+#  HWLOC_DIR             - Where to find the base directory of hwloc
+#  HWLOC_INCDIR          - Where to find the header files
+#  HWLOC_LIBDIR          - Where to find the library files
+# The module can also look for the following environment variables if paths
+# are not given as cmake variable: HWLOC_DIR, HWLOC_INCDIR, HWLOC_LIBDIR
+
+#=============================================================================
+# Copyright 2012-2013 Inria
+# Copyright 2012-2013 Emmanuel Agullo
+# Copyright 2012-2013 Mathieu Faverge
+# Copyright 2012      Cedric Castagnede
+# Copyright 2013      Florent Pruvost
+#
+# Distributed under the OSI-approved BSD License (the "License");
+# see accompanying file MORSE-Copyright.txt for details.
+#
+# This software is distributed WITHOUT ANY WARRANTY; without even the
+# implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+# See the License for more information.
+#=============================================================================
+# (To distribute this file outside of Morse, substitute the full
+#  License text for the above reference.)
+
+include(CheckStructHasMember)
+include(CheckCSourceCompiles)
+
+if (NOT HWLOC_FOUND)
+  set(HWLOC_DIR "" CACHE PATH "Installation directory of HWLOC library")
+  if (NOT HWLOC_FIND_QUIETLY)
+    message(STATUS "A cache variable, namely HWLOC_DIR, has been set to specify the install directory of HWLOC")
+  endif()
+endif()
+
+set(ENV_HWLOC_DIR "$ENV{HWLOC_DIR}")
+set(ENV_HWLOC_INCDIR "$ENV{HWLOC_INCDIR}")
+set(ENV_HWLOC_LIBDIR "$ENV{HWLOC_LIBDIR}")
+set(HWLOC_GIVEN_BY_USER "FALSE")
+if ( HWLOC_DIR OR ( HWLOC_INCDIR AND HWLOC_LIBDIR) OR ENV_HWLOC_DIR OR (ENV_HWLOC_INCDIR AND ENV_HWLOC_LIBDIR) )
+  set(HWLOC_GIVEN_BY_USER "TRUE")
+endif()
+
+# Optionally use pkg-config to detect include/library dirs (if pkg-config is available)
+# -------------------------------------------------------------------------------------
+include(FindPkgConfig)
+find_package(PkgConfig QUIET)
+if( PKG_CONFIG_EXECUTABLE AND NOT HWLOC_GIVEN_BY_USER )
+
+  pkg_search_module(HWLOC hwloc)
+  if (NOT HWLOC_FIND_QUIETLY)
+    if (HWLOC_FOUND AND HWLOC_LIBRARIES)
+      message(STATUS "Looking for HWLOC - found using PkgConfig")
+      #if(NOT HWLOC_INCLUDE_DIRS)
+      #    message("${Magenta}HWLOC_INCLUDE_DIRS is empty using PkgConfig."
+      #        "Perhaps the path to hwloc headers is already present in your"
+      #        "C(PLUS)_INCLUDE_PATH environment variable.${ColourReset}")
+      #endif()
+    else()
+      message(STATUS "${Magenta}Looking for HWLOC - not found using PkgConfig."
+	"\n   Perhaps you should add the directory containing hwloc.pc to"
+	"\n   the PKG_CONFIG_PATH environment variable.${ColourReset}")
+    endif()
+  endif()
+
+endif( PKG_CONFIG_EXECUTABLE AND NOT HWLOC_GIVEN_BY_USER )
+
+if( (NOT PKG_CONFIG_EXECUTABLE) OR (PKG_CONFIG_EXECUTABLE AND NOT HWLOC_FOUND) OR (HWLOC_GIVEN_BY_USER) )
+
+  if (NOT HWLOC_FIND_QUIETLY)
+    message(STATUS "Looking for HWLOC - PkgConfig not used")
+  endif()
+
+  # Looking for include
+  # -------------------
+
+  # Add system include paths to search include
+  # ------------------------------------------
+  unset(_inc_env)
+  if(ENV_HWLOC_INCDIR)
+    list(APPEND _inc_env "${ENV_HWLOC_INCDIR}")
+  elseif(ENV_HWLOC_DIR)
+    list(APPEND _inc_env "${ENV_HWLOC_DIR}")
+    list(APPEND _inc_env "${ENV_HWLOC_DIR}/include")
+    list(APPEND _inc_env "${ENV_HWLOC_DIR}/include/hwloc")
+  else()
+    if(WIN32)
+      string(REPLACE ":" ";" _inc_env "$ENV{INCLUDE}")
+    else()
+      string(REPLACE ":" ";" _path_env "$ENV{INCLUDE}")
+      list(APPEND _inc_env "${_path_env}")
+      string(REPLACE ":" ";" _path_env "$ENV{C_INCLUDE_PATH}")
+      list(APPEND _inc_env "${_path_env}")
+      string(REPLACE ":" ";" _path_env "$ENV{CPATH}")
+      list(APPEND _inc_env "${_path_env}")
+      string(REPLACE ":" ";" _path_env "$ENV{INCLUDE_PATH}")
+      list(APPEND _inc_env "${_path_env}")
+    endif()
+  endif()
+  list(APPEND _inc_env "${CMAKE_PLATFORM_IMPLICIT_INCLUDE_DIRECTORIES}")
+  list(APPEND _inc_env "${CMAKE_C_IMPLICIT_INCLUDE_DIRECTORIES}")
+  list(REMOVE_DUPLICATES _inc_env)
+
+  # set paths where to look for
+  set(PATH_TO_LOOK_FOR "${_inc_env}")
+
+  # Try to find the hwloc header in the given paths
+  # -------------------------------------------------
+  # call cmake macro to find the header path
+  if(HWLOC_INCDIR)
+    set(HWLOC_hwloc.h_DIRS "HWLOC_hwloc.h_DIRS-NOTFOUND")
+    find_path(HWLOC_hwloc.h_DIRS
+      NAMES hwloc.h
+      HINTS ${HWLOC_INCDIR})
+  else()
+    if(HWLOC_DIR)
+      set(HWLOC_hwloc.h_DIRS "HWLOC_hwloc.h_DIRS-NOTFOUND")
+      find_path(HWLOC_hwloc.h_DIRS
+	NAMES hwloc.h
+	HINTS ${HWLOC_DIR}
+	PATH_SUFFIXES "include" "include/hwloc")
+    else()
+      set(HWLOC_hwloc.h_DIRS "HWLOC_hwloc.h_DIRS-NOTFOUND")
+      find_path(HWLOC_hwloc.h_DIRS
+	NAMES hwloc.h
+	HINTS ${PATH_TO_LOOK_FOR}
+	PATH_SUFFIXES "hwloc")
+    endif()
+  endif()
+  mark_as_advanced(HWLOC_hwloc.h_DIRS)
+
+  # Add path to cmake variable
+  # ------------------------------------
+  if (HWLOC_hwloc.h_DIRS)
+    set(HWLOC_INCLUDE_DIRS "${HWLOC_hwloc.h_DIRS}")
+  else ()
+    set(HWLOC_INCLUDE_DIRS "HWLOC_INCLUDE_DIRS-NOTFOUND")
+    if(NOT HWLOC_FIND_QUIETLY)
+      message(STATUS "Looking for hwloc -- hwloc.h not found")
+    endif()
+  endif ()
+
+  if (HWLOC_INCLUDE_DIRS)
+    list(REMOVE_DUPLICATES HWLOC_INCLUDE_DIRS)
+  endif ()
+
+
+  # Looking for lib
+  # ---------------
+
+  # Add system library paths to search lib
+  # --------------------------------------
+  unset(_lib_env)
+  if(ENV_HWLOC_LIBDIR)
+    list(APPEND _lib_env "${ENV_HWLOC_LIBDIR}")
+  elseif(ENV_HWLOC_DIR)
+    list(APPEND _lib_env "${ENV_HWLOC_DIR}")
+    list(APPEND _lib_env "${ENV_HWLOC_DIR}/lib")
+  else()
+    if(WIN32)
+      string(REPLACE ":" ";" _lib_env "$ENV{LIB}")
+    else()
+      if(APPLE)
+	string(REPLACE ":" ";" _lib_env "$ENV{DYLD_LIBRARY_PATH}")
+      else()
+	string(REPLACE ":" ";" _lib_env "$ENV{LD_LIBRARY_PATH}")
+      endif()
+      list(APPEND _lib_env "${CMAKE_PLATFORM_IMPLICIT_LINK_DIRECTORIES}")
+      list(APPEND _lib_env "${CMAKE_C_IMPLICIT_LINK_DIRECTORIES}")
+    endif()
+  endif()
+  list(REMOVE_DUPLICATES _lib_env)
+
+  # set paths where to look for
+  set(PATH_TO_LOOK_FOR "${_lib_env}")
+
+  # Try to find the hwloc lib in the given paths
+  # ----------------------------------------------
+
+  # call cmake macro to find the lib path
+  if(HWLOC_LIBDIR)
+    set(HWLOC_hwloc_LIBRARY "HWLOC_hwloc_LIBRARY-NOTFOUND")
+    find_library(HWLOC_hwloc_LIBRARY
+      NAMES hwloc
+      HINTS ${HWLOC_LIBDIR})
+  else()
+    if(HWLOC_DIR)
+      set(HWLOC_hwloc_LIBRARY "HWLOC_hwloc_LIBRARY-NOTFOUND")
+      find_library(HWLOC_hwloc_LIBRARY
+	NAMES hwloc
+	HINTS ${HWLOC_DIR}
+	PATH_SUFFIXES lib lib32 lib64)
+    else()
+      set(HWLOC_hwloc_LIBRARY "HWLOC_hwloc_LIBRARY-NOTFOUND")
+      find_library(HWLOC_hwloc_LIBRARY
+	NAMES hwloc
+	HINTS ${PATH_TO_LOOK_FOR})
+    endif()
+  endif()
+  mark_as_advanced(HWLOC_hwloc_LIBRARY)
+
+  # If found, add path to cmake variable
+  # ------------------------------------
+  if (HWLOC_hwloc_LIBRARY)
+    get_filename_component(hwloc_lib_path ${HWLOC_hwloc_LIBRARY} PATH)
+    # set cmake variables (respects naming convention)
+    set(HWLOC_LIBRARIES    "${HWLOC_hwloc_LIBRARY}")
+    set(HWLOC_LIBRARY_DIRS "${hwloc_lib_path}")
+  else ()
+    set(HWLOC_LIBRARIES    "HWLOC_LIBRARIES-NOTFOUND")
+    set(HWLOC_LIBRARY_DIRS "HWLOC_LIBRARY_DIRS-NOTFOUND")
+    if(NOT HWLOC_FIND_QUIETLY)
+      message(STATUS "Looking for hwloc -- lib hwloc not found")
+    endif()
+  endif ()
+
+  if (HWLOC_LIBRARY_DIRS)
+    list(REMOVE_DUPLICATES HWLOC_LIBRARY_DIRS)
+  endif ()
+
+  # check a function to validate the find
+  if(HWLOC_LIBRARIES)
+
+    set(REQUIRED_INCDIRS)
+    set(REQUIRED_LIBDIRS)
+    set(REQUIRED_LIBS)
+
+    # HWLOC
+    if (HWLOC_INCLUDE_DIRS)
+      set(REQUIRED_INCDIRS "${HWLOC_INCLUDE_DIRS}")
+    endif()
+    if (HWLOC_LIBRARY_DIRS)
+      set(REQUIRED_LIBDIRS "${HWLOC_LIBRARY_DIRS}")
+    endif()
+    set(REQUIRED_LIBS "${HWLOC_LIBRARIES}")
+
+    # set required libraries for link
+    set(CMAKE_REQUIRED_INCLUDES "${REQUIRED_INCDIRS}")
+    set(CMAKE_REQUIRED_LIBRARIES)
+    foreach(lib_dir ${REQUIRED_LIBDIRS})
+      list(APPEND CMAKE_REQUIRED_LIBRARIES "-L${lib_dir}")
+    endforeach()
+    list(APPEND CMAKE_REQUIRED_LIBRARIES "${REQUIRED_LIBS}")
+    string(REGEX REPLACE "^ -" "-" CMAKE_REQUIRED_LIBRARIES "${CMAKE_REQUIRED_LIBRARIES}")
+
+    # test link
+    unset(HWLOC_WORKS CACHE)
+    include(CheckFunctionExists)
+    check_function_exists(hwloc_topology_init HWLOC_WORKS)
+    mark_as_advanced(HWLOC_WORKS)
+
+    if(NOT HWLOC_WORKS)
+      if(NOT HWLOC_FIND_QUIETLY)
+	message(STATUS "Looking for hwloc : test of hwloc_topology_init with hwloc library fails")
+	message(STATUS "CMAKE_REQUIRED_LIBRARIES: ${CMAKE_REQUIRED_LIBRARIES}")
+	message(STATUS "CMAKE_REQUIRED_INCLUDES: ${CMAKE_REQUIRED_INCLUDES}")
+	message(STATUS "Check in CMakeFiles/CMakeError.log to figure out why it fails")
+      endif()
+    endif()
+    set(CMAKE_REQUIRED_INCLUDES)
+    set(CMAKE_REQUIRED_FLAGS)
+    set(CMAKE_REQUIRED_LIBRARIES)
+  endif(HWLOC_LIBRARIES)
+
+endif( (NOT PKG_CONFIG_EXECUTABLE) OR (PKG_CONFIG_EXECUTABLE AND NOT HWLOC_FOUND) OR (HWLOC_GIVEN_BY_USER) )
+
+if (HWLOC_LIBRARIES)
+  if (HWLOC_LIBRARY_DIRS)
+    list(GET HWLOC_LIBRARY_DIRS 0 first_lib_path)
+  else()
+    list(GET HWLOC_LIBRARIES 0 first_lib)
+    get_filename_component(first_lib_path "${first_lib}" PATH)
+  endif()
+  if (${first_lib_path} MATCHES "/lib(32|64)?$")
+    string(REGEX REPLACE "/lib(32|64)?$" "" not_cached_dir "${first_lib_path}")
+    set(HWLOC_DIR_FOUND "${not_cached_dir}" CACHE PATH "Installation directory of HWLOC library" FORCE)
+  else()
+    set(HWLOC_DIR_FOUND "${first_lib_path}" CACHE PATH "Installation directory of HWLOC library" FORCE)
+  endif()
+endif()
+mark_as_advanced(HWLOC_DIR)
+mark_as_advanced(HWLOC_DIR_FOUND)
+
+# check that HWLOC has been found
+# -------------------------------
+include(FindPackageHandleStandardArgs)
+if (PKG_CONFIG_EXECUTABLE AND HWLOC_FOUND)
+  find_package_handle_standard_args(HWLOC DEFAULT_MSG
+    HWLOC_LIBRARIES)
+else()
+  find_package_handle_standard_args(HWLOC DEFAULT_MSG
+    HWLOC_LIBRARIES
+    HWLOC_WORKS)
+endif()
+
+if (HWLOC_FOUND)
+  set(HWLOC_SAVE_CMAKE_REQUIRED_INCLUDES ${CMAKE_REQUIRED_INCLUDES})
+  list(APPEND CMAKE_REQUIRED_INCLUDES ${HWLOC_INCLUDE_DIRS})
+
+  # test headers to guess the version
+  check_struct_has_member( "struct hwloc_obj" parent hwloc.h HAVE_HWLOC_PARENT_MEMBER )
+  check_struct_has_member( "struct hwloc_cache_attr_s" size hwloc.h HAVE_HWLOC_CACHE_ATTR )
+  check_c_source_compiles( "#include <hwloc.h>
+	    int main(void) { hwloc_obj_t o; o->type = HWLOC_OBJ_PU; return 0;}" HAVE_HWLOC_OBJ_PU)
+  include(CheckLibraryExists)
+  check_library_exists(${HWLOC_LIBRARIES} hwloc_bitmap_free "" HAVE_HWLOC_BITMAP)
+
+  set(CMAKE_REQUIRED_INCLUDES ${HWLOC_SAVE_CMAKE_REQUIRED_INCLUDES})
+endif()